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典型文献
Genomes of Two Flying Squid Species Provide Chek for Novel Insights into Adaptations of Cephalopods to Pelagic Life
文献摘要:
Pelagic cephalopods have evolved a series of fascinating traits,such as excellent visual acuity,high-speed agility,and photophores for adaptation to open pelagic oceans.However,the genetic mechanisms underpinning these traits are not well understood.Thus,in this study,we obtained high-quality genomes of two purpleback flying squid species(Sthenoteuthis oualaniensis and Sthenoteuthis sp.),with sizes of 5450 Mb and 5651 Mb,respectively.Comparative genomic analyses revealed that the S-crystallin subfamily SL20-1 associated with visual acuity in the purple-back flying squid lineage was significantly expanded,and the evolution of high-speed agility for the species was accompanied by significant positive selection pressure on genes related to energy meta-bolism.These molecular signals might have contributed to the evolution of their adaptative preda-tory and anti-predatory traits.In addition,the transcriptomic analysis provided clear indications of the evolution of the photophores of purpleback flying squids,especially the recruitment of new genes and energy metabolism-related genes which may have played key functional roles in the pro-cess.
文献关键词:
作者姓名:
Min Li;Baosheng Wu;Peng Zhang;Ye Li;Wenjie Xu;Kun Wang;Qiang Qiu;Jun Zhang;Jie Li;Chi Zhang;Jiangtao Fan;Chenguang Feng;Zuozhi Chen
作者机构:
South China Sea Fisheries Research Institute,Chinese Academy of Fishery Sciences,Guangzhou 510300,China;Southern Marine Science and Engineering Guangdong Laboratory(Guangzhou),Guangzhou 511458,China;Key Laboratory for Sustainable Utilization of Open-Sea Fishery,Ministry of Agriculture and Rural Affairs,Guangdong Provincial Key Laboratory of Fishery Ecology and Environment,Guangzhou 510300,China;School of Ecology and Environment,Northwestern Polytechnical University,Xi'an 710072,China;outh China Sea Fisheries Research Institute,Chinese Academy of Fishery Sciences,Guangzhou 510300,China;Qinghai Provincial Key Laboratory of Crop Molecular Breeding,CAS Key Laboratory of Adaptation and Evolution of Plateau Biota,Northwest Institute of Plateau Biology,Chinese Academy of Sciences,Xining 810008,China;CAS Key Laboratory of Aquatic Biodiversity and Conservation,Institute of Hydrobiology,Chinese Academy of Sciences,Wuhan 430072,China
引用格式:
[1]Min Li;Baosheng Wu;Peng Zhang;Ye Li;Wenjie Xu;Kun Wang;Qiang Qiu;Jun Zhang;Jie Li;Chi Zhang;Jiangtao Fan;Chenguang Feng;Zuozhi Chen-.Genomes of Two Flying Squid Species Provide Chek for Novel Insights into Adaptations of Cephalopods to Pelagic Life)[J].基因组蛋白质组与生物信息学报(英文版),2022(06):1053-1065
A类:
Provide,Chek,Adaptations,Cephalopods,Pelagic,photophores,purpleback,crystallin,SL20,preda,squids
B类:
Genomes,Two,Flying,Squid,Species,Novel,Insights,into,Life,cephalopods,have,evolved,series,fascinating,traits,such,excellent,visual,acuity,high,speed,agility,adaptation,open,pelagic,oceans,However,genetic,mechanisms,underpinning,these,are,well,understood,Thus,study,obtained,quality,genomes,two,flying,species,Sthenoteuthis,oualaniensis,sizes,Mb,respectively,Comparative,genomic,analyses,revealed,that,subfamily,associated,lineage,was,significantly,expanded,evolution,accompanied,by,positive,selection,pressure,genes,related,energy,These,molecular,signals,might,contributed,their,adaptative,anti,predatory,addition,transcriptomic,analysis,provided,clear,indications,especially,recruitment,new,metabolism,which,may,played,key,functional,roles,cess
AB值:
0.533009
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