首站-论文投稿智能助手
典型文献
The camphor tree genome enhances the understanding of magnoliid evolution
文献摘要:
Magnoliids represent the third largest branch of the most diverse and species-rich angiosperms,and their phylogenetic position rela-tive to monocots and eudicots remains uncertain(Dong et al.,2021).Here,we describe the assembly of a high-quality chromo-some-level genome sequence for Cinnamomum camphora(camphor),an evergreen tree belonging to Lauraceae.Genome-based phylogenetic analysis indicated possible incomplete lineage sorting(ILS)during the rapid diversification of the early diverging branches of angiosperms,which may have led to the unstable phylo-genetic position of magnoliids.Whole-genome duplication(WGD)analysis showed that the lineage leading to C.camphora experi-enced two WGD events:the earlier event was shared by the common ancestor of Chimonanthus salicifolius and Lauraceae,and the more recent event was shared by all lineages of Lauraceae.The ABCDE homolog genes of C.camphora showed broad expression in floral or-gans,revealing the molecular mechanism preventing tepals from differentiating into petals and sepals.The key genes for the synthesis of monoterpenes have been identified,and the molecular regulatory mechanism underlying the rich essential oils in the branches and leaves has been revealed.Overall,our study provides a better under-standing of the evolution and diversification of magnoliids and the evolution of floral organs.
文献关键词:
作者姓名:
Wei-Hong Sun;Shuang Xiang;Qi-Gong Zhang;Lin Xiao;Diyang Zhang;Peilan Zhang;De-Qiang Chen;Yang Hao;Ding-Kun Liu;Le Ding;Yifan Li;Hui Ni;Yifan Wang;Xi Wu;Fu-Hui Liu;Guo-Rui Chen;Guo-Yong Han;Jin-Zhang Chen;Bao-Chun Su;Jin-Xing Gao;Xiao-Hui Wan;Zhiwen Wang;Yicun Chen;Yang-Dong Wang;Wei Huang;Bobin Liu;Xiao-Xing Zou;Lin Ni;Zhong-Jian Liu;Shuang-Quan Zou
作者机构:
College of Forestry,Fujian Agriculture and Forestry,Fuzhou,Fujian 350002,China;Fujian Colleges and Universities Engineering Research Institute of Conservation and Utilization of Natural Bioresources,Fujian Agriculture and Forestry,Fuzhou,Fujian 350002,China;Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture,Fujian Agriculture and Forestry University,Fuzhou,Fujian 350002,China;Fuzhou Botanical Garden,Fuzhou,Fujian 350002,China;Quanzhou Forestry Bureau,Quanzhou,Fujian 362000,China;Fujian Provincial Forestry Inventory and Planning Institute,Fuzhou,Fujian 350002,China;PubBio-Tech,Wuhan,Hubei 430070,China;Research Institute of Subtropical Forestry,Chinese Academy of Forestry,Hangzhou,Zhejiang 311400,China
文献出处:
引用格式:
[1]Wei-Hong Sun;Shuang Xiang;Qi-Gong Zhang;Lin Xiao;Diyang Zhang;Peilan Zhang;De-Qiang Chen;Yang Hao;Ding-Kun Liu;Le Ding;Yifan Li;Hui Ni;Yifan Wang;Xi Wu;Fu-Hui Liu;Guo-Rui Chen;Guo-Yong Han;Jin-Zhang Chen;Bao-Chun Su;Jin-Xing Gao;Xiao-Hui Wan;Zhiwen Wang;Yicun Chen;Yang-Dong Wang;Wei Huang;Bobin Liu;Xiao-Xing Zou;Lin Ni;Zhong-Jian Liu;Shuang-Quan Zou-.The camphor tree genome enhances the understanding of magnoliid evolution)[J].遗传学报,2022(03):249-253
A类:
magnoliid,Magnoliids,salicifolius,tepals,sepals,monoterpenes
B类:
tree,genome,enhances,understanding,evolution,represent,third,largest,most,diverse,species,rich,angiosperms,their,phylogenetic,position,rela,tive,monocots,eudicots,remains,uncertain,Dong,Here,describe,assembly,high,quality,chromo,some,level,sequence,Cinnamomum,camphora,evergreen,belonging,Lauraceae,Genome,analysis,indicated,possible,incomplete,sorting,ILS,during,rapid,diversification,early,diverging,branches,which,may,have,unstable,magnoliids,Whole,duplication,WGD,showed,that,leading,experi,enced,two,events,earlier,was,shared,by,common,ancestor,Chimonanthus,more,recent,lineages,ABCDE,homolog,genes,broad,expression,floral,revealing,molecular,mechanism,preventing,from,differentiating,into,petals,key,synthesis,been,identified,regulatory,underlying,essential,oils,leaves,has,revealed,Overall,our,study,provides,better,organs
AB值:
0.567324
相似文献
Identification of chorion genes and RNA interference-mediated functional characterization of chorion-1 in Plutella xylostella
DONG Shi-jie;LIU Bo;ZOU Ming-min;LIU Li-li;CAO Min-hui;HUANG Meng-qi;LIU Yan;Liette VASSEUR;YOU Min-sheng;PENG Lu-State Key Laboratory of Ecological Pest Control for Fujian-Taiwan Crops,Institute of Applied Ecology,Fujian Agriculture and Forestry University,Fuzhou 350002,P.R.China;International Joint Research Laboratory of Ecological Pest Control of Ministry of Education,Fujian Agriculture and Forestry University,Fuzhou 350002,P.R.China;Ministerial and Provincial Joint Innovation Centre for Safety Production of Cross-Strait Crops,Fujian Agriculture and Forestry University,Fuzhou 350002,P.R.China;Key Laboratory of Integrated Pest Management for Fujian-Taiwan Crops,Ministry of Agriculture and Rural Affairs,Fuzhou 350002,P.R.China;Fujian Provincial Key Laboratory of Insect Ecology,Fujian Agriculture and Forestry University,Fuzhou 350002,P.R.China;Agricultural Genomics Institute at Shenzhen,Chinese Academy of Agricultural Sciences,Shenzhen 518120,P.R.China;Department of Biological Sciences,Brock University,St.Catharines,Ontario L2S 3A1,Canada
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere
Bin-Bin Liu;Chen Ren;Myounghai Kwak;Richard G.J.Hodel;Chao Xu;Jian He;Wen-Bin Zhou;Chien-Hsun Huang;Hong Ma;Guan-Ze Qian;De-Yuan Hong;Jun Wen-State Key Laboratory of Systematic and Evolutionary Botany,Institute of Botany,the Chinese Academy of Sciences,Beijing 100093,China;Department of Botany,National Museum of Natural History,Smithsonian Institution,PO Box 37012,Washington 20013–7012,DC,USA;Key Laboratory of Plant Resources Conservation and Sustainable Utilization,South China Botanical Garden,The Chinese Academy of Sciences,Guangzhou 510650,China;Guangdong Provincial Key Laboratory of Applied Botany,South China Botanical Garden,The Chinese Academy of Sciences,Guangzhou 510650,China;National Institute of Biological Resources,Incheon 22689,South Korea;School of Ecology and Nature Conservation,Beijing Forestry University,Beijing 100083,China;Department of Plant and Microbial Biology,North Carolina State University,Raleigh 27965,NC,USA;State Key Laboratory of Genetic Engineering and Collaborative Innovation Center of Genetics and Development,Ministry of Education Key Laboratory of Biodiversity and Ecological Engineering,Institute of Plant Biology,Center of Evolutionary Biology,School of Life Sciences,Fudan University,Shanghai 200433,China;Department of Biology,Huck Institutes of the Life Sciences,Pennsylvania State University,510D Mueller Laboratory,University Park,Pennsylvania 16802,USA;College of Life Sciences,Liaocheng University,Liaocheng 252059,China
Cultivated hawthorn (Crataegus pinnatifida var. major) genome sheds light on the evolution of Maleae (apple tribe)
Ticao Zhang;Qin Qiao;Xiao Du;Xiao Zhang;Yali Hou;Xin Wei;Chao Sun;Rengang Zhang;Quanzheng Yun;M.James C.Crabbe;Yves Van de Peer;Wenxuan Dong-College of Chinese Material Medica,Yunnan University of Chinese Medicine,Kunming 650500,China;School of Agriculture,Yunnan University,Kunming 650091,China;College of Horticulture,Shenyang Agricultural University,Shenyang 110866,China;Key Laboratory of Beibu Gulf Environment Change and Resources Utilization of Ministry of Education,Nanning Normal University,Guangxi,Nanning 530001,China;Beijing Ori-Gene Science and Technology Co.Ltd,Beijing 102206,China;Wolfson College,Oxford University,Oxford,UK;Institute of Biomedical and Environmental Science & Technology,School of Life Sciences,University of Bedfordshire,Park Square,Luton,UK;School of Life Sciences,Shanxi University,Taiyuan 030006,China;Department of Plant Biotechnology and Bioinformatics,Center for Plant Systems Biology,Ghent University,VIB,9052,Ghent,Belgium;Department of Biochemistry,Genetics and Microbiology,University of Pretoria,Pretoria 0028,South Africa;College of Horticulture,Nanjing Agricultural University,Nanjing 210095,China
Ruminant-specific genes identified using high-quality genome data and their roles in rumen evolution
Chunyan Chen;Yuan Yin;Haorong Li;Botong Zhou;Jiong Zhou;Xiaofang Zhou;Zhipeng Li;Guichun Liu;Xiangyu Pan;Ru Zhang;Zeshan Lin;Lei Chen;Qiang Qiu;Yong E.Zhang;Wen Wang-School of Ecology and Environment,Northwestern Poly technical University,Xi'an 710072,China;College of Animal Science and Technology,Jilin Agricultural University,Changchun 130118,China;State Key Laboratory of Genetic Resources and Evolution,Kunming Institute of Zoology,Chinese Academy of Sciences,Kunming 650223,China;Department of Gastroenterology,Guangdong Provincial People's Hospital,Guangdong Academy of Medical Sciences,Guangzhou 510080,China;Guangdong Cardiovascular Institute,Guangzhou 510080,China;Key Laboratory of Zoological Systematics and Evolution,Institute of Zoology,Chinese Academy of Sciences,Beijing 100101,China;University of Chinese Academy of Sciences,Beijing 100049,China;Center for Excellence in Animal Evolution and Genetics,Chinese Academy of Sciences,Kunming 650223,China
Chromosome-level genome assembly and resequencing of camphor tree(Cinnamomum camphora)provides insight into phylogeny and diversification of terpenoid and triglyceride biosynthesis of Cinnamomum
Xin-Dong Wang;Chun-Yan Xu;Yong-Jie Zheng;Yan-Fang Wu;Yue-Ting Zhang;Ting Zhang;Zhen-Yu Xiong;Hai-Kuan Yang;Jiang Li;Chao Fu;Feng-Ying Qiu;Xiao-Ying Dai;Xin-Liang Liu;Xiao-San He;Song-Song Zhou;Sheng-Xing Li;Tao Fu;Han Xie;Yan-Ling Chen;Qian-Qian Zhang;Hong-Qi Wang;Yang-Dong Wang;Cheng Zhou;Xiang-Mei Jiang-Camphor Engineering and Technology Research Center of National Forestry and Grassland Administration,Jiangxi Academy of Forestry,Nanchang 330032,China;Jiangxi Provincial Key Lab for Plant Biotechnology,Jiangxi Academy of Forestry,Nanchang 330032,Jiangxi,China;BGI Genomics,BGI-Shenzhen,Shenzhen 518083,China;Research Institute of Subtropical Forestry,Chinese Academy of Forestry,Hangzhou 311400,China
The genome of Hibiscus hamabo reveals its adaptation to saline and waterlogged habitat
Zhiquan Wang;Jia-Yu Xue;Shuai-Ya Hu;Fengjiao Zhang;Ranran Yu;Dijun Chen;Yves Van de Peer;Jiafu Jiang;Aiping Song;Longjie Ni;Jianfeng Hua;Zhiguo Lu;Chaoguang Yu;Yunlong Yin;Chunsun Gu-Institute of Botany,Jiangsu Province and Chinese Academy of Sciences,Nanjing,210014,China;College of Horticulture,Academy for Advanced Interdisciplinary Studies,Nanjing Agricultural University,Nanjing 210095,China;State Key Laboratory of Pharmaceutical Biotechnology,School of Life Sciences,Nanjing University,Nanjing 210023,China;Department of Plant Biotechnology and Bioinformatics,Ghent University,VIB-UGent Center for Plant Systems Biology,B-9052 Ghent,Belgium;Department of Biochemistry,Genetics and Microbiology,University of Pretoria,Pretoria 0028,South Africa;College of Horticulture,Nanjing Agricultural University,Nanjing 210095,China;College of Forest Sciences,Nanjing Forestry University,Nanjing,210037,China;Jiangsu Key Laboratory for the Research and Utilization of Plant Resources,Jiangsu Utilization of Agricultural Germplasm,Nanjing,210014,China
机标中图分类号,由域田数据科技根据网络公开资料自动分析生成,仅供学习研究参考。