典型文献
Transcriptome Profile Based on Protein-Protein Interaction Networks Provides a Set of Core Genes for Understanding the Metabolic Mechanisms of the Egg-Protecting Behavior in Amphioctopus fangsiao
文献摘要:
Marine organisms cannot grow and reproduce without proper metabolic regulation.Within a metabolic network,problems with a given link will affect the normal life activities of the organism.Many metabolic mechanisms associated with behaviors of Am-phioctopus fangsiao are still unclear.Moreover,as a factor affecting the normal growth of A.fangsiao,egg protection has rarely been considered in previous behavioral studies.In this research,we analyzed the transcriptome profile of gene expression in A.fangsiao egg-unprotected larvae and egg-protected larvae,and identified 818 differentially expressed genes(DEGs).We used GO and KEGG enrichment analyses to search for metabolism-related DEGs.Protein-protein interaction networks were constructed to examine the interactions between metabolism-related genes.Twenty hub genes with multiple protein-protein interaction relationships or that were involved in multiple KEGG signaling pathways were obtained and verified by quantitative RT-PCR.We first studied the effects of egg protection on the metabolism of A.fangsiao larvae by means of protein-protein interaction networks,and the results provide va-luable gene resources for understanding the metabolism of invertebrate larvae.The data serve as a foundation for further research on the egg-protecting behavior of invertebrates.
文献关键词:
中图分类号:
作者姓名:
BAO Xiaokai;LI Zan;ZHANG Jianbai;LI Yan;CHEN Xipan;WANG Weijun;SUN Guohua;XU Xiaohui;LIU Xiumei;FENG Yanwei;YANG Jianmin
作者机构:
School of Agriculture,Ludong University,Yantai 264025,China;Yantai Marine Economic Research Institute,Yantai 264004,China;College of Life Sciences,Yantai University,Yantai 264005,China
文献出处:
引用格式:
[1]BAO Xiaokai;LI Zan;ZHANG Jianbai;LI Yan;CHEN Xipan;WANG Weijun;SUN Guohua;XU Xiaohui;LIU Xiumei;FENG Yanwei;YANG Jianmin-.Transcriptome Profile Based on Protein-Protein Interaction Networks Provides a Set of Core Genes for Understanding the Metabolic Mechanisms of the Egg-Protecting Behavior in Amphioctopus fangsiao)[J].中国海洋大学学报(自然科学英文版),2022(05):1323-1333
A类:
Amphioctopus,phioctopus,luable
B类:
Transcriptome,Profile,Based,Protein,Interaction,Networks,Provides,Set,Core,Genes,Understanding,Metabolic,Mechanisms,Egg,Protecting,Behavior,fangsiao,Marine,organisms,cannot,reproduce,without,proper,metabolic,regulation,Within,problems,given,link,will,normal,life,activities,Many,mechanisms,associated,behaviors,still,unclear,Moreover,affecting,growth,egg,protection,has,rarely,been,considered,previous,behavioral,studies,this,research,analyzed,transcriptome,profile,expression,unprotected,larvae,identified,differentially,expressed,genes,DEGs,We,used,enrichment,analyses,metabolism,related,protein,networks,were,constructed,examine,interactions,between,Twenty,hub,multiple,relationships,that,involved,signaling,pathways,obtained,verified,by,quantitative,first,studied,effects,means,results,provide,resources,understanding,data,serve,foundation,further,protecting,invertebrates
AB值:
0.540534
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