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典型文献
Diversity and conservation of plant small secreted proteins associated with arbuscular mycorrhizal symbiosis
文献摘要:
Arbuscular mycorrhizal symbiosis(AMS)is widespread mutualistic association between plants and fungi,which plays an essential role in nutrient exchange,enhancement in plant stress resistance,development of host,and ecosystem sustainability.Previous studies have shown that plant small secreted proteins(SSPs)are involved in beneficial symbiotic interactions.However,the role of SSPs in the evolution of AMS has not been well studied yet.In this study,we performed computational analysis of SSPs in 60 plant species and identified three AMS-specific ortholog groups containing SSPs only from at least 30%of the AMS species in this study and three AMS-preferential ortholog groups containing SSPs from both AMS and non-AMS species,with AMS species containing significantly more SSPs than non-AMS species.We found that independent lineages of monocot and eudicot plants contained genes in the AMS-specific ortholog groups and had significant expansion in the AMS-preferential ortholog groups.Also,two AMS-preferential ortholog groups showed convergent changes,between monocot and eudicot species,in gene expression in response to arbuscular mycorrhizal fungus Rhizophagus irregularis.Furthermore,conserved cis-elements were identified in the promoter regions of the genes showing convergent gene expression.We found that the SSPs,and their closely related homologs,in each of three AMS-preferential ortholog groups,had some local variations in the protein structural alignment.We also identified genes co-expressed with the Populus trichocarpa SSP genes in the AMS-preferential ortholog groups.This first plant kingdom-wide analysis on SSP provides insights on plant-AMS convergent evolution with specific SSP gene expression and local diversification of protein structures.
文献关键词:
作者姓名:
Xiao-Li Hu;Jin Zhang;Rakesh Kaundal;Raghav Kataria;Jesse L.Labbé;Julie C.Mitchell;Timothy J.Tschaplinski;Gerald A.Tuskan;Zong-Ming(Max)Cheng;Xiaohan Yang
作者机构:
Department of Plant Sciences,University of Tennessee,Knoxville,TN 37996,USA;Biosciences Division,Oak Ridge National Laboratory,Oak Ridge,TN 37831,USA;State Key Laboratory of Subtropical Silviculture,Zhejiang A&F University,Hangzhou,Zhejiang 311300,China;Department of Plants,Soils and Climate,Utah State University,Logan,UT 84322,USA;The Center for Bioenergy Innovation,Oak Ridge National Laboratory,Oak Ridge,TN 37831,USA;College of Horticulture,Nanjing Agricultural University,Nanjing,Jiangsu 210095 China
引用格式:
[1]Xiao-Li Hu;Jin Zhang;Rakesh Kaundal;Raghav Kataria;Jesse L.Labbé;Julie C.Mitchell;Timothy J.Tschaplinski;Gerald A.Tuskan;Zong-Ming(Max)Cheng;Xiaohan Yang-.Diversity and conservation of plant small secreted proteins associated with arbuscular mycorrhizal symbiosis)[J].园艺研究(英文),2022(05):160-172
A类:
eudicot
B类:
Diversity,conservation,small,secreted,proteins,associated,arbuscular,mycorrhizal,symbiosis,Arbuscular,AMS,widespread,mutualistic,association,between,plants,fungi,which,plays,essential,role,nutrient,exchange,enhancement,stress,resistance,development,host,ecosystem,sustainability,Previous,studies,have,shown,that,SSPs,are,involved,beneficial,symbiotic,interactions,However,evolution,has,not,been,well,studied,yet,In,this,study,performed,computational,analysis,species,identified,three,specific,ortholog,groups,containing,only,from,least,preferential,both,significantly,than,We,found,independent,lineages,monocot,contained,genes,had,expansion,Also,two,showed,convergent,changes,expression,response,fungus,Rhizophagus,irregularis,Furthermore,conserved,cis,elements,were,promoter,regions,showing,their,closely,related,homologs,each,some,local,variations,structural,alignment,also,expressed,Populus,trichocarpa,This,first,kingdom,provides,insights,diversification,structures
AB值:
0.472076
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