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典型文献
NORMA:The Network Makeup Artist-A Web Tool for Network Annotation Visualization
文献摘要:
The Network Makeup Artist(NORMA)is a web tool for interactive network annotation visualization and topological analysis,able to handle multiple networks and annotations simultane-ously.Precalculated annotations(e.g.,Gene Ontology,Pathway enrichment,community detection,or clustering results)can be uploaded and visualized in a network,either as colored pie-chart nodes or as color-filled areas in a 2D/3D Venn-diagram-like style.In the case where no annotation exists,algorithms for automated community detection are offered.Users can adjust the network views using standard layout algorithms or allow NORMA to slightly modify them for visually better group separation.Once a network view is set,users can interactively select and highlight any group of interest in order to generate publication-ready figures.Briefly,with NORMA,users can encode three types of information simultaneously.These are 1)the network,2)the communities or anno-tations of interest,and 3)node categories or expression values.Finally,NORMA offers basic topo-logical analysis and direct topological comparison across any of the selected networks.
文献关键词:
作者姓名:
Mikaela Koutrouli;Evangelos Karatzas;Katerina Papanikolopoulou;Georgios A.Pavlopoulos
作者机构:
Institute for Fundamental Biomedical Research,BSRC"Alexander Fleming",Vari 16672,Greece;Department of Informatics and Telecommunications,University of Athens,Athens 15703,Greece
引用格式:
[1]Mikaela Koutrouli;Evangelos Karatzas;Katerina Papanikolopoulou;Georgios A.Pavlopoulos-.NORMA:The Network Makeup Artist-A Web Tool for Network Annotation Visualization)[J].基因组蛋白质组与生物信息学报(英文版),2022(03):578-586
A类:
NORMA,Artist,Precalculated,anno
B类:
Network,Makeup,Tool,Annotation,Visualization,web,tool,visualization,topological,analysis,able,handle,multiple,networks,annotations,Gene,Ontology,Pathway,enrichment,community,detection,clustering,results,can,uploaded,visualized,either,colored,pie,chart,nodes,filled,areas,2D,Venn,diagram,like,style,In,case,where,exists,algorithms,automated,offered,Users,adjust,views,using,standard,layout,allow,slightly,modify,them,visually,better,group,separation,Once,set,users,interactively,highlight,any,interest,order,generate,publication,ready,figures,Briefly,encode,three,types,information,simultaneously,These,communities,categories,expression,values,Finally,offers,basic,direct,comparison,across,selected
AB值:
0.551531
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