典型文献
Building a cattle pan-genome using more de novo assemblies
文献摘要：
A reference genome assembled from a single individual cannot capture the complex population level of polymorphism,especially for genetically divergent or admixed populations(Sherman et al.,2019).A complete genome data representative of a species rather than one individual,termed as pan-genome,can recover the genomic diversity and variations that are absent in the reference genome.Notably,using the assemblies of closely related species could efficiently recover the missing sequences and improve the mappability of the reference genome,which was confirmed in goat pan-genome(Li et al.,2019a).The gene pool of cattle(mainly contrib-uted by taurine and indicine cattle),representing one of the most important livestock in the world,is more complexed,with genetically and geographically diverse populations and origins(Verdugo et al.,2019).In addition,the mapping ability of the sequencing data of DNA samples to the reference genome can vary greatly because of incomplete lineage sorting(ILS)and pervasive intra-and inter-species introgression that further increase the complex of genetic variation in cattle,as well as the genus Bos(Chen et al.,2018;Wu et al.,2018).
文献关键词：
中图分类号：
作者姓名：
Mian Gong;Peng Yang;Wenwen Fang;Ran Li;Yu Jiang
作者机构：
Key Laboratory of Animal Genetics,Breeding and Reproduction of Shaanxi Province,College of Animal Science and Technology,Northwest A&F University,Yangling,Shaanxi 712100,China
文献出处：
引用格式：
[1]Mian Gong;Peng Yang;Wenwen Fang;Ran Li;Yu Jiang-.Building a cattle pan-genome using more de novo assemblies)[J].遗传学报,2022(09):906-908
A类：
admixed,mappability,indicine,Verdugo
B类：
Building,cattle,pan,genome,using,more,de,novo,assemblies,reference,assembled,from,single,individual,cannot,capture,level,polymorphism,especially,genetically,divergent,populations,Sherman,data,representative,species,rather,than,one,termed,recover,genomic,diversity,variations,that,are,absent,Notably,closely,related,could,efficiently,missing,sequences,improve,which,was,confirmed,goat,Li,2019a,pool,mainly,contrib,uted,by,taurine,representing,most,important,livestock,world,complexed,geographically,diverse,origins,In,addition,mapping,sequencing,samples,vary,greatly,because,incomplete,lineage,sorting,ILS,pervasive,intra,inter,introgression,further,increase,well,genus,Bos,Chen,Wu
AB值：
0.564753
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