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典型文献
Reveal the Population Genetic Characteristics of Bombay Duck(Harpadon nehereus)in Coastal Waters of China with Genotyping-by-Sequencing Technique
文献摘要:
Bombay duck(Harpadon nehereus)is an economically important species in the estuarine and coastal offshore waters of the Indo-West Pacific.This study aims to reveal the genome-wide genetic characteristics of five populations of H.nehereus from the coastal areas of China by using the genotyping-by-sequencing technique.After strict filtering,32088 high-quality single-nucleotide polymorphism markers were detected and analyzed.The average observed heterozygosity and expected heterozygosity ranged from 0.41651 to 0.56725 and from 0.30998 to 0.45531,respectively,indicating that heterozygosity excess occurred in H.nehereus popula-tions.The nucleotide diversity ranged from 0.63664 to 0.74868,which was larger than those from other marine fishes.No obvious genetic structure was detected among H.nehereus populations,and the genetic variation originated within individuals.Extensive gene exchange caused by longshore currents in the reproductive season might be the primary reason for the weak genetic differentia-tion.Among various environmental factors,water temperature might be the key element affecting the genetic structure of H.nehe-reus.Due to the destruction and overfishing of spawning grounds,the fishery resources declined in recent years.This study could serve as a reference for the resource protection and rational utilization of H.nehereus.
文献关键词:
作者姓名:
YANG Tianyan;HUANG Xinxin;JIANG Yanlin
作者机构:
Fisheries College,Zhejiang Ocean University,Zhoushan 316022,China;Key Laboratory of Informatization of Habitat Monitoring and Fishery Resource Conservation Research in the East China Sea of Zhejiang Province,Zhejiang Ocean University,Zhoushan 316022,China
引用格式:
[1]YANG Tianyan;HUANG Xinxin;JIANG Yanlin-.Reveal the Population Genetic Characteristics of Bombay Duck(Harpadon nehereus)in Coastal Waters of China with Genotyping-by-Sequencing Technique)[J].中国海洋大学学报(自然科学英文版),2022(05):1373-1380
A类:
Bombay,longshore,nehe
B类:
Reveal,Population,Genetic,Characteristics,Duck,Harpadon,nehereus,Coastal,Waters,China,Genotyping,by,Sequencing,Technique,duck,economically,important,species,estuarine,coastal,offshore,waters,Indo,West,Pacific,This,study,aims,reveal,genome,wide,genetic,characteristics,five,populations,from,areas,using,genotyping,sequencing,technique,After,strict,filtering,high,quality,single,nucleotide,polymorphism,markers,were,detected,analyzed,average,observed,heterozygosity,expected,ranged,respectively,indicating,that,excess,occurred,diversity,which,was,larger,than,those,other,marine,fishes,No,obvious,structure,among,variation,originated,within,individuals,Extensive,exchange,caused,currents,reproductive,season,might,be,primary,reason,weak,differentia,Among,various,environmental,factors,temperature,key,element,affecting,Due,destruction,overfishing,spawning,grounds,fishery,resources,declined,recent,years,could,reference,protection,rational,utilization
AB值:
0.626228
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